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EP-Flow: Disordered Crystal Structure Prediction without Site-Level Annotations

Generative models have made rapid progress in ordered crystal structure prediction, yet many functional materials are intrinsically disordered, with substitutional mixing, vacancies, or interstitial species controlling…

By Liu, Wu, Li +5

Score████░░░░░░3.8

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Abstract

Generative models have made rapid progress in ordered crystal structure prediction, yet many functional materials are intrinsically disordered, with substitutional mixing, vacancies, or interstitial species controlling their properties. Existing crystal generators either assume deterministic site occupations or require site-level disorder annotations, which are often unavailable when the chemical formula is the primary input. We formulate disordered crystal structure prediction through an Occupancy Distribution Matrix (ODM), a continuous site-by-species representation that unifies ordered crystals, solid solutions, vacancy disorder, and interstitial occupancy. A valid ODM must satisfy coupled site-wise occupancy, mass-conservation, and non-negativity constraints, placing each sample on a formula-dependent transportation polytope. We propose Entropic Polytope Flow (EP-Flow), a marginal-constrained flow matching framework that canonicalizes heterogeneous polytopes into a shared double-centered space, learns a marginal-preserving flow, and recovers feasible occupancies through a Sinkhorn inverse map. By jointly generating occupancies, fractional coordinates, and lattice parameters, EP-Flow achieves state-of-the-art performance on formula-conditioned disordered CSP benchmarks derived from COD and MPDS, substantially outperforming adapted ordered-crystal generators. Analyses further show that EP-Flow recovers sparse and chemically meaningful local disorder patterns rather than merely matching global composition statistics.

Qiuliang Liu, Liming Wu, Qi Li, Zhonglong Peng, Chang Chen, Xiaolong Chen, Wenbing Huang, Shifeng Jin

The editor's rubric

Heuristic review

DimensionLevelWeightWhat that level means
Leverage███░░ 324%A method or resource many groups across the field will adopt within a year.
Magnitude███░░ 318%Large gain: roughly 2x, or a clear new state of the art on a hard, unsaturated problem.
Evidence███░░ 314%Solid: multiple benchmarks or cohorts, ablations, fair baselines, released code or data.
Novelty███░░ 316%A genuinely new approach to an open problem.
Trajectory██░░░ 218%Some room to improve with obvious engineering.
Stakes██░░░ 210%Benefits a professional community (practitioners, clinicians, engineers).

Editor’s rationale

Heuristic triage from title and abstract text only, not a reading of the paper. Cues found: method (we propose); gains (state of the art, outperforms); novelty (alternative to status quo); verification (experimental validation); stakes (global scale).

How the score was computed

rank-2026-09-29

Score████░░░░░░3.8

Score = 10 × (65% × adjusted merit / 10 + 25% × attention + 10% × freshness)

Merit
5.4 / 10
Weighted rubric, evidence-gated.
Adjusted merit
4.6 / 10
Shrunk toward the desk prior by editor confidence (42%).
Attention
0%
Citations, upvotes, points, mentions.
Freshness
82%
Half-life decay since publication.

No attention signals recorded yet.

The record

  • Reviewed by heuristic-v2 on Oct 2, 2026, 02:05 UTC. Paper type: method.
  • Categories: cs.LG, cond-mat.dis-nn
  • BRIEF, No.4 in the Physics edition of October 2, 2026.